ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6E8W9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6E8W9_F1_nD1

A0A1D6E8W9_F1_nD1

UID: 003681923

AlphaFold

Range: 6-100,221-240
AlphaFold: AF-A0A1D6E8W9
UniProt: A0A1D6E8W9 (all domains)
Gene: ZEAMMB73_Zm00001d003378

Protein: RNA-dependent RNA polymerase (EC 2.7.7.48)

3D Structure

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Related Domains

Browse other domains in RRM_RdRP1_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_RdRP1_2(304.9.1.96)

Pfam Families

PF26250RRM_RdRP1_2

RdRP1/2, RRM domain

ClanCL0221RRM

External Links

AlphaFold DB: A0A1D6E8W9 UniProt: A0A1D6E8W9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-100,221-240