ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6I5L8_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6I5L8_F1_nD4

A0A1D6I5L8_F1_nD4

UID: 003683475

AlphaFold

Range: 456-540
AlphaFold: AF-A0A1D6I5L8
UniProt: A0A1D6I5L8 (all domains)
Gene: ZEAMMB73_Zm00001d020680

Protein: PHD finger protein MALE STERILITY 1

3D Structure

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Related Domains

Browse other domains in Ubiquitin_At1g33420 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_At1g33420(221.1.1.167)

Pfam Families

PF25565Ubiquitin_At1g33420

At1g33420-like, ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: A0A1D6I5L8 UniProt: A0A1D6I5L8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 456-540