ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D6MF59_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6MF59_F1_nD2

A0A1D6MF59_F1_nD2

UID: 003684523

AlphaFold

Range: 1-40,96-180
AlphaFold: AF-A0A1D6MF59
UniProt: A0A1D6MF59 (all domains)
Gene: ZEAMMB73_Zm00001d039307

Protein: DNA-directed RNA polymerase (EC 2.7.7.6)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb1_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyRNA_pol_Rpb1_2(1.1.2.2)

Pfam Families

PF00623RNA_pol_Rpb1_2

RNA polymerase Rpb1, domain 2

External Links

AlphaFold DB: A0A1D6MF59 UniProt: A0A1D6MF59

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-40,96-180