ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1C1CT00_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CT00_F1_nD2

A0A1C1CT00_F1_nD2

UID: 003686264

AlphaFold

Range: 116-220
AlphaFold: AF-A0A1C1CT00
UniProt: A0A1C1CT00 (all domains)
Gene: sap62

Protein: Pre-mRNA-splicing factor sap62

3D Structure

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Related Domains

Browse other domains in SF3A2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupHSP20-like(319)

HH-groupPre-mRNA-splicing factor PRP11 C-terminal domain(319.2)

TT-groupPre-mRNA-splicing factor PRP11 C-terminal domain(319.2.1)

FFamilySF3A2(319.2.1.1)

Pfam Families

Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)

External Links

AlphaFold DB: A0A1C1CT00 UniProt: A0A1C1CT00

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-220