ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1C1CVW6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CVW6_F1_nD2

A0A1C1CVW6_F1_nD2

UID: 003690431

AlphaFold

Range: 286-345
AlphaFold: AF-A0A1C1CVW6
UniProt: A0A1C1CVW6 (all domains)
Gene: nob1

Protein: 20S-pre-rRNA D-site endonuclease NOB1

3D Structure

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Related Domains

Browse other domains in NOB1_Zn_bind →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupNOB1 zinc finger-like(375.5)

TT-groupNOB1 zinc finger-like(375.5.1)

FFamilyNOB1_Zn_bind(375.5.1.1)

Pfam Families

PF08772Zn_ribbon_NOB1

Nin one binding (NOB1) Zn-ribbon like

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: A0A1C1CVW6 UniProt: A0A1C1CVW6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-345