ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1C1CF09_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CF09_F1_nD2

A0A1C1CF09_F1_nD2

UID: 003690802

AlphaFold

Range: 316-420,601-770
AlphaFold: AF-A0A1C1CF09
UniProt: A0A1C1CF09 (all domains)
Gene: rat1

Protein: 5'-3' exoribonuclease (EC 3.1.13.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in XRN_M →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHelical domain in 5'->3' exoribonucleases(3279)

HH-groupHelical domain in 5'->3' exoribonucleases(3279.1)

TT-groupHelical domain in 5'->3' exoribonucleases(3279.1.1)

FFamilyXRN_M(3279.1.1.1)

Pfam Families

Xrn1 helical domain

External Links

AlphaFold DB: A0A1C1CF09 UniProt: A0A1C1CF09

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 316-420,601-770