ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1C1CP34_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CP34_F1_nD3

A0A1C1CP34_F1_nD3

UID: 003693716

AlphaFold

Range: 461-565
AlphaFold: AF-A0A1C1CP34
UniProt: A0A1C1CP34 (all domains)
Gene: rsd1

Protein: RNA-binding protein rsd1

3D Structure

Loading viewer...

Related Domains

Browse other domains in RRM_1, RBM39linker →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1, RBM39linker(304.9.1.83)

Pfam Families

RNA recognition motif

ClanCL0221RRM

PF15519RBM39linker

linker between RRM2 and RRM3 domains in RBM39 protein

External Links

AlphaFold DB: A0A1C1CP34 UniProt: A0A1C1CP34

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 461-565