ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1C1CED9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CED9_F1_nD4

A0A1C1CED9_F1_nD4

UID: 003694934

AlphaFold

Range: 481-605
AlphaFold: AF-A0A1C1CED9
UniProt: A0A1C1CED9 (all domains)
Gene: spt5

Protein: Transcription elongation factor SPT5

3D Structure

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Related Domains

Browse other domains in KOW2_Spt5 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyKOW2_Spt5(4.1.1.249)

Pfam Families

PF23284KOW2_Spt5

Transcription elongation factor SPT5, second KOW domain

ClanCL0010SH3

External Links

AlphaFold DB: A0A1C1CED9 UniProt: A0A1C1CED9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 481-605