ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1C1CV09_F1_nD7 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CV09_F1_nD7

A0A1C1CV09_F1_nD7

UID: 003695390

AlphaFold

Range: 421-500
AlphaFold: AF-A0A1C1CV09
UniProt: A0A1C1CV09 (all domains)
Gene: prp40

Protein: Pre-mRNA-processing protein prp40

3D Structure

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Related Domains

Browse other domains in FF_PRPF40A →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupFF domain(101.1.17)

FFamilyFF_PRPF40A(101.1.17.18)

Pfam Families

PF25432FF_PRPF40A

PRPF40A-like, FF domain

ClanCL0584FF

External Links

AlphaFold DB: A0A1C1CV09 UniProt: A0A1C1CV09

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 421-500