ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1C1CLM2_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CLM2_F1_nD4

A0A1C1CLM2_F1_nD4

UID: 003696825

AlphaFold

Range: 656-710,866-915
AlphaFold: AF-A0A1C1CLM2
UniProt: A0A1C1CLM2 (all domains)
Gene: TOP1

Protein: DNA topoisomerase I (EC 5.6.2.1) (DNA topoisomerase 1)

3D Structure

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Related Domains

Browse other domains in Topoisom_I,Topo_C_assoc →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupDNA breaking-rejoining enzymes(101.1.8)

FFamilyTopoisom_I,Topo_C_assoc(101.1.8.3)

Pfam Families

PF01028Topoisom_I

Eukaryotic DNA topoisomerase I, catalytic core

ClanCL0382DNA-mend

PF14370Topo_C_assoc

C-terminal topoisomerase domain

External Links

AlphaFold DB: A0A1C1CLM2 UniProt: A0A1C1CLM2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 656-710,866-915