ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1C1CIM6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1C1CIM6_F1_nD2

A0A1C1CIM6_F1_nD2

UID: 003697821

AlphaFold

Range: 11-20,146-435
AlphaFold: AF-A0A1C1CIM6
UniProt: A0A1C1CIM6 (all domains)
Gene: YDR341C

Protein: arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1d →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1d(2005.1.1.7)

Pfam Families

PF00750tRNA-synt_1d

tRNA synthetases class I (R), catalytic domain

ClanCL0039HUP

External Links

AlphaFold DB: A0A1C1CIM6 UniProt: A0A1C1CIM6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-20,146-435