ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q4D2F5_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q4D2F5_F1_nD5

Q4D2F5_F1_nD5

UID: 003700899

AlphaFold

Range: 346-408
AlphaFold: AF-Q4D2F5
UniProt: Q4D2F5 (all domains)
Gene: Tc00.1047053505201.9

Protein: Retrotransposon hot spot (RHS) protein, putative

3D Structure

Loading viewer...

Related Domains

Browse other domains in DUF7578 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyDUF7578(102.1.1.95)

Pfam Families

PF24466DUF7578

Domain of unknown function (DUF7578)

External Links

AlphaFold DB: Q4D2F5 UniProt: Q4D2F5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 346-408