ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q4DGJ9_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q4DGJ9_F1_nD5

Q4DGJ9_F1_nD5

UID: 003703935

AlphaFold

Range: 546-595
AlphaFold: AF-Q4DGJ9
UniProt: Q4DGJ9 (all domains)
Gene: Tc00.1047053511625.10

Protein: Transcription initiation protein, putative

3D Structure

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Related Domains

Browse other domains in KOWx_SPT5 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyKOWx_SPT5(4.1.1.236)

Pfam Families

PF23037KOWx_SPT5

Transcription elongation factor SPT5, KOWx domain

ClanCL0010SH3

External Links

AlphaFold DB: Q4DGJ9 UniProt: Q4DGJ9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 546-595