ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q4D4Z8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q4D4Z8_F1_nD2

Q4D4Z8_F1_nD2

UID: 003706550

AlphaFold

Range: 491-675
AlphaFold: AF-Q4D4Z8
UniProt: Q4D4Z8 (all domains)
Gene: Tc00.1047053511269.60

Protein: Vacuolar protein sorting complex subunit, putative

3D Structure

Loading viewer...

Related Domains

Browse other domains in Vps16_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps16_C(109.4.1.72)

Pfam Families

PF04840Vps16_C

Vps16, C-terminal region

ClanCL0020TPR

External Links

AlphaFold DB: Q4D4Z8 UniProt: Q4D4Z8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 491-675