ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q4CS11_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q4CS11_F1_nD5

Q4CS11_F1_nD5

UID: 003708558

AlphaFold

Range: 341-715
AlphaFold: AF-Q4CS11
UniProt: Q4CS11 (all domains)
Gene: Tc00.1047053410923.20

Protein: Retrotransposon hot spot (RHS) protein, putative

3D Structure

Loading viewer...

Related Domains

Browse other domains in RHSP, RHS_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRHSP, RHS_N(2004.1.1.427)

Pfam Families

Retrotransposon hot spot protein, P-loop domain

ClanCL0023P-loop_NTPase

Retrotransposon hot spot proteins N-terminal

External Links

AlphaFold DB: Q4CS11 UniProt: Q4CS11

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 341-715