ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4DVI6_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q4DVI6_F1_nD5

Q4DVI6_F1_nD5

UID: 003710063

AlphaFold

Range: 681-820
AlphaFold: AF-Q4DVI6
UniProt: Q4DVI6 (all domains)
Gene: Tc00.1047053506961.160

Protein: Retrotransposon hot spot (RHS) protein, putative

3D Structure

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Related Domains

Browse other domains in RHSP →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyRHSP(148.1.3.174)

Pfam Families

Retrotransposon hot spot protein, P-loop domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q4DVI6 UniProt: Q4DVI6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 681-820