ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4E680_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q4E680_F1_nD1

Q4E680_F1_nD1

UID: 003710700

AlphaFold

Range: 6-80,106-135
AlphaFold: AF-Q4E680
UniProt: Q4E680 (all domains)
Gene: Tc00.1047053508153.120

Protein: Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)

3D Structure

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Related Domains

Browse other domains in zf-UBP_var →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP_var(376.1.1.32)

Pfam Families

PF17807zf-UBP_var

Variant UBP zinc finger

ClanCL0229RING

External Links

AlphaFold DB: Q4E680 UniProt: Q4E680

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-80,106-135