ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q4D1M9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q4D1M9_F1_nD3

Q4D1M9_F1_nD3

UID: 003710785

AlphaFold

Range: 86-120,236-534
AlphaFold: AF-Q4D1M9
UniProt: Q4D1M9 (all domains)
Gene: Tc00.1047053510763.80

Protein: DNA polymerase II subunit 2

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_pol_E_B →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupMetallo-dependent phosphatases(246.2)

TT-groupMetallo-dependent phosphatases(246.2.1)

FFamilyDNA_pol_E_B(246.2.1.7)

Pfam Families

PF04042DNA_pol_E_B

DNA polymerase alpha/epsilon subunit B

ClanCL0163Calcineurin

External Links

AlphaFold DB: Q4D1M9 UniProt: Q4D1M9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-120,236-534