ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q4DC18_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q4DC18_F1_nD1

Q4DC18_F1_nD1

UID: 003710916

AlphaFold

Range: 6-320
AlphaFold: AF-Q4DC18
UniProt: Q4DC18 (all domains)
Gene: Tc00.1047053511415.11

Protein: Retrotransposon hot spot (RHS) protein, putative

3D Structure

Loading viewer...

Related Domains

Browse other domains in RHSP, RHS_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRHSP, RHS_N(2004.1.1.427)

Pfam Families

Retrotransposon hot spot protein, P-loop domain

ClanCL0023P-loop_NTPase

Retrotransposon hot spot proteins N-terminal

External Links

AlphaFold DB: Q4DC18 UniProt: Q4DC18

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-320