ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q4D3G7_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q4D3G7_F1_nD2

Q4D3G7_F1_nD2

UID: 003711246

AlphaFold

Range: 16-35,71-465
AlphaFold: AF-Q4D3G7
UniProt: Q4D3G7 (all domains)
Gene: Tc00.1047053503981.60

Protein: tRNA:m(4)X modification enzyme TRM13 (EC 2.1.1.225)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TRM13 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyTRM13(2003.1.5.95)

Pfam Families

Methyltransferase TRM13

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q4D3G7 UniProt: Q4D3G7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-35,71-465