ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4D133_F1_nD8 - ECOD Domain | ECOD

ECOD/Domains/Q4D133_F1_nD8

Q4D133_F1_nD8

UID: 003711603

AlphaFold

Range: 1241-1295,1676-1795
AlphaFold: AF-Q4D133
UniProt: Q4D133 (all domains)
Gene: Tc00.1047053511381.40

Protein: DNA-directed RNA polymerase (EC 2.7.7.6)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_5 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954)

HH-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954.1)

TT-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954.1.1)

FFamilyRNA_pol_Rpb1_5(4954.1.1.1)

Pfam Families

PF04998RNA_pol_Rpb1_5

RNA polymerase Rpb1, domain 5

External Links

AlphaFold DB: Q4D133 UniProt: Q4D133

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1241-1295,1676-1795