ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4DMH8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q4DMH8_F1_nD3

Q4DMH8_F1_nD3

UID: 003712530

AlphaFold

Range: 396-480
AlphaFold: AF-Q4DMH8
UniProt: Q4DMH8 (all domains)
Gene: Tc00.1047053508881.70

Protein: DNA ligase, putative (EC 6.5.1.1)

3D Structure

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Related Domains

Browse other domains in DNA_ligase_OB_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_ligase_OB_2(2.1.1.65)

Pfam Families

PF14743DNA_ligase_OB_2

DNA ligase OB-like domain

ClanCL0021OB

External Links

AlphaFold DB: Q4DMH8 UniProt: Q4DMH8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 396-480