ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4DQ61_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q4DQ61_F1_nD4

Q4DQ61_F1_nD4

UID: 003716435

RepresentativeAlphaFold

Range: 196-245,426-480
AlphaFold: AF-Q4DQ61
UniProt: Q4DQ61 (all domains)
Gene: Tc00.1047053508119.140

Protein: Retrotransposon hot spot (RHS) protein, putative

3D Structure

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Related Domains

Browse other domains in RHSP, RHS_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyRHSP, RHS_N(148.1.3.356)

Pfam Families

Retrotransposon hot spot protein, P-loop domain

ClanCL0023P-loop_NTPase

Retrotransposon hot spot proteins N-terminal

External Links

AlphaFold DB: Q4DQ61 UniProt: Q4DQ61

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 196-245,426-480