ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q4D342_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q4D342_F1_nD1

Q4D342_F1_nD1

UID: 003716764

AlphaFold

Range: 6-65
UniProt: Q4D342 (all domains)
Gene: Tc00.1047053506887.60

Protein: Small nuclear RNA gene activation protein (SNAP) 50, putative

3D Structure

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Related Domains

Browse other domains in PF30403 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupLysM domain(101.15)

TT-groupLysM domain(101.15.1)

FFamilyPF30403(101.15.1.12)

Pfam Families

PF30403LysM_MltD

Lytic transglycosylase MltD, LysM-like domain

ClanCL0187LysM

External Links

UniProt: Q4D342

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