ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4D7N8_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q4D7N8_F1_nD4

Q4D7N8_F1_nD4

UID: 003717677

AlphaFold

Range: 446-460,496-553,581-680
AlphaFold: AF-Q4D7N8
UniProt: Q4D7N8 (all domains)
Gene: Tc00.1047053503447.40

Protein: Retrotransposon hot spot (RHS) protein, putative

3D Structure

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Related Domains

Browse other domains in RHSP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyRHSP(2008.1.1.118)

Pfam Families

Retrotransposon hot spot protein, P-loop domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q4D7N8 UniProt: Q4D7N8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 446-460,496-553,581-680