ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0D2GNE1_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2GNE1_F1_nD6

A0A0D2GNE1_F1_nD6

UID: 003720489

AlphaFold

Range: 976-1110
AlphaFold: AF-A0A0D2GNE1
UniProt: A0A0D2GNE1 (all domains)
Gene: Z517_06655

Protein: 5'-3' exoribonuclease 1 (EC 3.1.13.-)

3D Structure

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Related Domains

Browse other domains in XRN1_D2_D3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyXRN1_D2_D3(101.1.2.167)

Pfam Families

PF18334XRN1_D2_D3

Exoribonuclease Xrn1 D2/D3 domain

ClanCL0010SH3

External Links

AlphaFold DB: A0A0D2GNE1 UniProt: A0A0D2GNE1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 976-1110