ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0D2H5P7_F1_nD13 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2H5P7_F1_nD13

A0A0D2H5P7_F1_nD13

UID: 003721146

AlphaFold

Range: 1516-1790
AlphaFold: AF-A0A0D2H5P7
UniProt: A0A0D2H5P7 (all domains)
Gene: Z517_01585

Protein: rRNA biogenesis protein RRP5 (Ribosomal RNA-processing protein 5)

3D Structure

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Related Domains

Browse other domains in HAT_Syf1_CNRKL1_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHAT_Syf1_CNRKL1_C(109.4.1.890)

Pfam Families

PF23231HAT_Syf1_CNRKL1_C

Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat

ClanCL0020TPR

External Links

AlphaFold DB: A0A0D2H5P7 UniProt: A0A0D2H5P7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1516-1790