ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3i4nK1 - ECOD Domain | ECOD

ECOD/Domains/e3i4nK1

e3i4nK1

UID: 000372235

PDB

Range: K:1-116
PDB: 3I4N chain K(all domains)
UniProt: P38902 (all domains)
Gene: RPB11

Molecule: DNA-directed RNA polymerase II subunit RPB11 (RNA polymerase II subunit B11) (B13.6) (DNA-directed RNA polymerase II 13.6 kDa polypeptide)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_L_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDCoH-like(305)

HH-groupRBP11-like subunits of RNA polymerase(305.1)

TT-groupRBP11-like subunits of RNA polymerase(305.1.1)

FFamilyRNA_pol_L_2(305.1.1.2)

Pfam Families

PF13656RNA_pol_L_2

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

ECOD PDB View: 3I4N RCSB PDB: 3I4N PDBe: 3I4N UniProt: P38902

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure