ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0D2GGP9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2GGP9_F1_nD2

A0A0D2GGP9_F1_nD2

UID: 003722772

AlphaFold

Range: 291-350
AlphaFold: AF-A0A0D2GGP9
UniProt: A0A0D2GGP9 (all domains)
Gene: Z517_06573

Protein: 20S-pre-rRNA D-site endonuclease NOB1

3D Structure

Loading viewer...

Related Domains

Browse other domains in NOB1_Zn_bind →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupNOB1 zinc finger-like(375.5)

TT-groupNOB1 zinc finger-like(375.5.1)

FFamilyNOB1_Zn_bind(375.5.1.1)

Pfam Families

PF08772Zn_ribbon_NOB1

Nin one binding (NOB1) Zn-ribbon like

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: A0A0D2GGP9 UniProt: A0A0D2GGP9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 291-350