ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0D2GUM1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2GUM1_F1_nD1

A0A0D2GUM1_F1_nD1

UID: 003724090

AlphaFold

Range: 326-345,381-395,458-508,551-570
AlphaFold: AF-A0A0D2GUM1
UniProt: A0A0D2GUM1 (all domains)
Gene: Z517_05342

Protein: Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpc4 →

Classification

AArchitecturebeta complex topology(a.5)

XX-grouptriple barrel(59)

HH-grouptriple barrel(59.1)

TT-groupRap30/74 interaction domains-like(59.1.1)

FFamilyRNA_pol_Rpc4(59.1.1.2)

Pfam Families

PF05132RNA_pol_Rpc4

RNA polymerase III RPC4

ClanCL0662Triple_barrel

External Links

AlphaFold DB: A0A0D2GUM1 UniProt: A0A0D2GUM1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 326-345,381-395,458-508,551-570