ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0D2FHK1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2FHK1_F1_nD1

A0A0D2FHK1_F1_nD1

UID: 003725532

AlphaFold

Range: 13-100
AlphaFold: AF-A0A0D2FHK1
UniProt: A0A0D2FHK1 (all domains)
Gene: Z517_01557

Protein: tRNA-splicing endonuclease subunit Sen34 (EC 4.6.1.16)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TSEN34_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-grouptRNA-intron endonuclease N-terminal domain-like(242.2)

TT-grouptRNA-intron endonuclease N-terminal domain-like(242.2.1)

FFamilyTSEN34_N(242.2.1.7)

Pfam Families

PF26577TSEN34_N

TSEN34-like, N-terminal domain

ClanCL0476tRNA-IECD_N

External Links

AlphaFold DB: A0A0D2FHK1 UniProt: A0A0D2FHK1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 13-100