ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0D2F0A9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2F0A9_F1_nD2

A0A0D2F0A9_F1_nD2

UID: 003727662

AlphaFold

Range: 236-315
AlphaFold: AF-A0A0D2F0A9
UniProt: A0A0D2F0A9 (all domains)
Gene: Z517_06622

Protein: GIY-YIG domain-containing protein

3D Structure

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Related Domains

Browse other domains in SLX1_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilySLX1_C(376.1.1.37)

Pfam Families

Structure-specific endonuclease subunit SLX1, C-terminal

ClanCL0229RING

External Links

AlphaFold DB: A0A0D2F0A9 UniProt: A0A0D2F0A9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-315