ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0D2H1Q8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2H1Q8_F1_nD2

A0A0D2H1Q8_F1_nD2

UID: 003729937

AlphaFold

Range: 486-865
AlphaFold: AF-A0A0D2H1Q8
UniProt: A0A0D2H1Q8 (all domains)
Gene: Z517_00203

Protein: Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein

3D Structure

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Related Domains

Browse other domains in Pectate_lyase_3 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPectate_lyase_3(207.2.1.20)

Pfam Families

PF12708Pect-lyase_RHGA_epim

Rhamnogalacturonase A/epimerase, pectate lyase-like

ClanCL0268Pec_lyase-like

External Links

AlphaFold DB: A0A0D2H1Q8 UniProt: A0A0D2H1Q8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 486-865