ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0D2GD05_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2GD05_F1_nD2

A0A0D2GD05_F1_nD2

UID: 003731548

AlphaFold

Range: 381-590,851-875
AlphaFold: AF-A0A0D2GD05
UniProt: A0A0D2GD05 (all domains)
Gene: Z517_08994

Protein: SSD domain-containing protein

3D Structure

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Related Domains

Browse other domains in NPC1_MLD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilyNPC1_MLD(304.28.1.5)

Pfam Families

PF22314NPC1_MLD

NPC1, middle luminal domain

ClanCL0322RND_permease

External Links

AlphaFold DB: A0A0D2GD05 UniProt: A0A0D2GD05

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 381-590,851-875