ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0D2HMR0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2HMR0_F1_nD1

A0A0D2HMR0_F1_nD1

UID: 003732573

AlphaFold

Range: 1-295
AlphaFold: AF-A0A0D2HMR0
UniProt: A0A0D2HMR0 (all domains)
Gene: Z517_01136

Protein: tRNA ligase (EC 6.5.1.3)

3D Structure

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Related Domains

Browse other domains in RNA_lig_T4_1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyRNA_lig_T4_1(206.1.3.24)

Pfam Families

PF09511RNA_lig_T4_1

RNA ligase

ClanCL0179ATP-grasp

External Links

AlphaFold DB: A0A0D2HMR0 UniProt: A0A0D2HMR0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-295