ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0D2GBF6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2GBF6_F1_nD2

A0A0D2GBF6_F1_nD2

UID: 003732879

AlphaFold

Range: 316-395
AlphaFold: AF-A0A0D2GBF6
UniProt: A0A0D2GBF6 (all domains)
Gene: Z517_10855

Protein: Mediator of RNA polymerase II transcription subunit 6 (Mediator complex subunit 6)

3D Structure

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Related Domains

Browse other domains in ubiquitin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

AlphaFold DB: A0A0D2GBF6 UniProt: A0A0D2GBF6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 316-395