ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0D2EQ20_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2EQ20_F1_nD2

A0A0D2EQ20_F1_nD2

UID: 003733629

RepresentativeAlphaFold

Range: 396-460
AlphaFold: AF-A0A0D2EQ20
UniProt: A0A0D2EQ20 (all domains)
Gene: Z517_11173

Protein: DNA-directed RNA polymerase subunit (EC 2.7.7.6)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupinserted helical subdomain in bacterial RNA-polymerase beta-prime subunit(4951)

HH-groupinserted helical subdomain in bacterial RNA-polymerase beta-prime subunit(4951.1)

TT-groupinserted helical subdomain in bacterial RNA-polymerase beta-prime subunit(4951.1.1)

FFamilyRNA_pol_Rpb1_2(4951.1.1.1)

Pfam Families

PF00623RNA_pol_Rpb1_2

RNA polymerase Rpb1, domain 2

External Links

AlphaFold DB: A0A0D2EQ20 UniProt: A0A0D2EQ20

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 396-460