ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0D2FIM3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2FIM3_F1_nD2

A0A0D2FIM3_F1_nD2

UID: 003735535

AlphaFold

Range: 181-225,341-350,391-410,441-680
AlphaFold: AF-A0A0D2FIM3
UniProt: A0A0D2FIM3 (all domains)
Gene: Z517_01910

Protein: Transport protein particle subunit trs85-2

3D Structure

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Related Domains

Browse other domains in TRAPPC-Trs85 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTRAPPC-Trs85(109.4.1.339)

Pfam Families

PF12739TRAPPC-Trs85

ER-Golgi trafficking TRAPP I complex 85 kDa subunit

External Links

AlphaFold DB: A0A0D2FIM3 UniProt: A0A0D2FIM3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 181-225,341-350,391-410,441-680