ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0D2EQ20_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A0D2EQ20_F1_nD3

A0A0D2EQ20_F1_nD3

UID: 003736523

AlphaFold

Range: 366-395,461-545
AlphaFold: AF-A0A0D2EQ20
UniProt: A0A0D2EQ20 (all domains)
Gene: Z517_11173

Protein: DNA-directed RNA polymerase subunit (EC 2.7.7.6)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb1_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyRNA_pol_Rpb1_2(1.1.2.2)

Pfam Families

PF00623RNA_pol_Rpb1_2

RNA polymerase Rpb1, domain 2

External Links

AlphaFold DB: A0A0D2EQ20 UniProt: A0A0D2EQ20

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 366-395,461-545