ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q1MTQ9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q1MTQ9_F1_nD2

Q1MTQ9_F1_nD2

UID: 003737118

AlphaFold

Range: 96-170
AlphaFold: AF-Q1MTQ9
UniProt: Q1MTQ9 (all domains)
Gene: nip7

Protein: 60S ribosome subunit biogenesis protein nip7

3D Structure

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Related Domains

Browse other domains in UPF0113 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyUPF0113(1.1.9.6)

Pfam Families

PF03657UPF0113

UPF0113 PUA domain

ClanCL0178PUA

External Links

AlphaFold DB: Q1MTQ9 UniProt: Q1MTQ9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-170