ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q09870_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q09870_F1_nD2

Q09870_F1_nD2

UID: 003737586

AlphaFold

Range: 186-285
AlphaFold: AF-Q09870
UniProt: Q09870 (all domains)
Gene: rcl1

Protein: rRNA processing protein rcl1

3D Structure

Loading viewer...

Related Domains

Browse other domains in RTC_insert →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupRNA 3'-terminal phosphate cyclase, RPTC, insert domain(2485.2)

TT-groupRNA 3'-terminal phosphate cyclase, RPTC, insert domain(2485.2.1)

FFamilyRTC_insert(2485.2.1.1)

Pfam Families

PF05189RTC_insert

RNA 3'-terminal phosphate cyclase (RTC), insert domain

External Links

AlphaFold DB: Q09870 UniProt: Q09870

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-285