ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P12000_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P12000_F1_nD1

P12000_F1_nD1

UID: 003737874

AlphaFold

Range: 146-250
AlphaFold: AF-P12000
UniProt: P12000 (all domains)
Gene: cdc17

Protein: DNA ligase 1 (EC 6.5.1.1) (DNA ligase I) (Polydeoxyribonucleotide synthase [ATP] 1)

3D Structure

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Related Domains

Browse other domains in DNA_ligase_A_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupATP-dependent DNA ligase DNA-binding domain(4095)

HH-groupATP-dependent DNA ligase DNA-binding domain(4095.1)

TT-groupATP-dependent DNA ligase DNA-binding domain(4095.1.1)

FFamilyDNA_ligase_A_N(4095.1.1.1)

Pfam Families

PF04675DNA_ligase_A_N

DNA ligase N terminus

External Links

AlphaFold DB: P12000 UniProt: P12000

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 146-250