ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9Y802_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9Y802_F1_nD2

Q9Y802_F1_nD2

UID: 003738757

AlphaFold

Range: 241-770
AlphaFold: AF-Q9Y802
UniProt: Q9Y802 (all domains)
Gene: lsd1

Protein: Lysine-specific histone demethylase 1 (EC 1.14.99.66)

3D Structure

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Related Domains

Browse other domains in Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFlavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain(2003.1.2.18)

Pfam Families

PF01593Amino_oxidase

Flavin containing amine oxidoreductase

ClanCL0063NADP_Rossmann

PF13450NAD_binding_8

NAD(P)-binding Rossmann-like domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q9Y802 UniProt: Q9Y802

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 241-770