ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O60156_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O60156_F1_nD1

O60156_F1_nD1

UID: 003738865

AlphaFold

Range: 6-85
AlphaFold: AF-O60156
UniProt: O60156 (all domains)
Gene: sen34

Protein: Probable tRNA-splicing endonuclease subunit sen34 (EC 4.6.1.16) (tRNA-intron endonuclease sen34)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TSEN34_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-grouptRNA-intron endonuclease N-terminal domain-like(242.2)

TT-grouptRNA-intron endonuclease N-terminal domain-like(242.2.1)

FFamilyTSEN34_N(242.2.1.7)

Pfam Families

PF26577TSEN34_N

TSEN34-like, N-terminal domain

ClanCL0476tRNA-IECD_N

External Links

AlphaFold DB: O60156 UniProt: O60156

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-85