ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O14086_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/O14086_F1_nD4

O14086_F1_nD4

UID: 003739297

AlphaFold

Range: 336-415
AlphaFold: AF-O14086
UniProt: O14086 (all domains)
Gene: rpa49

Protein: DNA-directed RNA polymerase I subunit rpa49 (RNA polymerase I subunit A49) (DNA-directed RNA polymerase I 49 kDa polypeptide)

3D Structure

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Related Domains

Browse other domains in RNA_pol_I_A49 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRNA_pol_I_A49(101.1.2.79)

Pfam Families

PF06870RNA_pol_I_A49

A49-like RNA polymerase I associated factor

ClanCL0662Triple_barrel

External Links

AlphaFold DB: O14086 UniProt: O14086

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 336-415