ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O13915_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O13915_F1_nD1

O13915_F1_nD1

UID: 003739681

AlphaFold

Range: 66-265
AlphaFold: AF-O13915
UniProt: O13915 (all domains)
Gene: usb1

Protein: U6 snRNA phosphodiesterase 1 (3'-5' RNA exonuclease USB1) (EC 4.6.1.-) (Mutated in Poikiloderma with Neutropenia protein 1)

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamilyHVSL(264.1.1.6)

Pfam Families

Uncharacterised conserved protein

ClanCL02472H

External Links

AlphaFold DB: O13915 UniProt: O13915

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-265