ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O13955_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O13955_F1_nD2

O13955_F1_nD2

UID: 003739714

AlphaFold

Range: 306-390,426-610
AlphaFold: AF-O13955
UniProt: O13955 (all domains)
Gene: vam6

Protein: Vacuolar morphogenesis protein 6 (Vacuolar protein sorting-associated protein 39)

3D Structure

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Related Domains

Browse other domains in Vps39_1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps39_1(109.4.1.308)

Pfam Families

PF10366Vps39_1

Vacuolar sorting protein 39 domain 1

ClanCL0020TPR

External Links

AlphaFold DB: O13955 UniProt: O13955

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 306-390,426-610