ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O13955_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/O13955_F1_nD4

O13955_F1_nD4

UID: 003739715

AlphaFold

Range: 856-905
AlphaFold: AF-O13955
UniProt: O13955 (all domains)
Gene: vam6

Protein: Vacuolar morphogenesis protein 6 (Vacuolar protein sorting-associated protein 39)

3D Structure

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Related Domains

Browse other domains in Vps39_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyVps39_2(377.1.1.20)

Pfam Families

PF10367zf-Vps39_C

Vacuolar sorting protein 39 C-terminal zinc finger domain

ClanCL0229RING

External Links

AlphaFold DB: O13955 UniProt: O13955

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 856-905