ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O74835_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/O74835_F1_nD6

O74835_F1_nD6

UID: 003740008

AlphaFold

Range: 966-1050
AlphaFold: AF-O74835
UniProt: O74835 (all domains)
Gene: rrp5

Protein: rRNA biogenesis protein rrp5 (Ribosomal RNA-processing protein 5) (U3 small nucleolar RNA-associated protein rrp5) (U3 snoRNA-associated protein rrp5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in S1_RRP5 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyS1_RRP5(2.1.1.177)

Pfam Families

PF23459S1_RRP5

RRP5 S1 domain

ClanCL0021OB

External Links

AlphaFold DB: O74835 UniProt: O74835

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 966-1050