ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q09820_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q09820_F1_nD3

Q09820_F1_nD3

UID: 003740731

AlphaFold

Range: 631-845
AlphaFold: AF-Q09820
UniProt: Q09820 (all domains)
Gene: upf1

Protein: ATP-dependent helicase upf1 (EC 3.6.4.12) (EC 3.6.4.13) (Nonsense-mediated mRNA decay protein upf1) (Regulator of nonsense transcripts 1 homolog) (Up-frameshift suppressor 1)

3D Structure

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Related Domains

Browse other domains in AAA_12 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_12(2004.1.1.186)

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q09820 UniProt: Q09820

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 631-845